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This list of phylogenetic tree viewing software is a compilation of software tools and web portals used in visualising phylogenetic trees .
Online software [ ]
Name
Description
Site
Citation
Hypergeny
visualise large phylogenies with this hyperbolic tree browser
[1]
iTOL - interactive Tree Of Life
annotate trees with various types of data and export to various graphical formats; scriptable through a batch interface
[2]
-
Phylodendron
different tree styles, branch styles and output graphical formats
[3]
PhyloWidget
view, edit, and publish phylogenetic trees online; interfaces with databases
[4]
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Applications [ ]
Name
Description
OS1
Site
Citation
BayesTrees
A program designed to display, analyse and manipulate samples of trees, in particular Bayesian samples.
W
[5]
Dendroscope
An interactive viewer for large phylogenetic trees and networks
All
[6] [7]
FigTree
Modern treeviewer with coloring and collapsing
All
[8]
Geneious Pro
All-in-one sequence analysis, phylogenetics and molecular cloning application with modern treeviewer
All
[9]
NJplot
Interactive tree plotter, re-roots, exports as PDF
All
[10]
TreeDyn
Very powerful open-source software for tree manipulation and annotation allowing incorporation of meta information
All
[11] [12]
TreeView
Classic treeviewing software that is very highly cited [13]
All
[14] -
UGENE
An opensource visual interface for Phylip 3.6 package
All
[15]
1 "All" refers to Microsoft Windows, Apple OSX and Linux; L=Linux, M=Apple Mac, W=Microsoft Windows
External links [ ] See also [ ] List of phylogenetics software